STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
scyTo_0018237Uncharacterized protein. (1006 aa)    
Predicted Functional Partners:
scyTo_0023709
DZF domain-containing protein.
   
 
 0.991
scyTo_0014394
Uncharacterized protein.
   
 
0.946
scyTo_0010246
Uncharacterized protein.
   
 
 0.898
scyTo_0012890
Uncharacterized protein.
    
 
 0.863
scyTo_0020018
Protein kinase domain-containing protein.
    
 
 0.863
scyTo_0019042
Uncharacterized protein.
   
 
 0.860
scyTo_0013547
ELAV-like protein; Belongs to the RRM elav family.
   
 
 0.812
scyTo_0022062
25A_SYNTH_3 domain-containing protein.
   
 
 0.760
scyTo_0010965
Uncharacterized protein.
   
 
 0.751
scyTo_0007200
RRM domain-containing protein.
   
 
 0.718
Your Current Organism:
Scyliorhinus torazame
NCBI taxonomy Id: 75743
Other names: S. torazame, cloudy catshark
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.