STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
scyTo_0017373Uncharacterized protein. (458 aa)    
Predicted Functional Partners:
scyTo_0013465
Uncharacterized protein.
    
 
 0.845
scyTo_0005460
Uncharacterized protein; Belongs to the DEAD box helicase family.
    
 
 0.778
scyTo_0007780
U1-type domain-containing protein.
   
    0.752
scyTo_0012541
Uncharacterized protein; Belongs to the heat shock protein 70 family.
   
    0.750
scyTo_0015086
Uncharacterized protein.
   
    0.681
scyTo_0013974
Pyr_redox_dim domain-containing protein.
   
    0.678
scyTo_0018866
Pyr_redox_2 domain-containing protein.
   
    0.678
scyTo_0025749
Pyr_redox_dim domain-containing protein.
   
    0.678
scyTo_0026138
Pyr_redox domain-containing protein.
   
    0.678
scyTo_0014174
Uncharacterized protein.
    
 0.666
Your Current Organism:
Scyliorhinus torazame
NCBI taxonomy Id: 75743
Other names: S. torazame, cloudy catshark
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.