STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
scyTo_0019871AMP_N domain-containing protein. (101 aa)    
Predicted Functional Partners:
scyTo_0011171
YrdC-like domain-containing protein.
    
  0.721
scyTo_0005532
YrdC-like domain-containing protein.
    
  0.721
scyTo_0004461
DAO domain-containing protein.
  
 
 0.707
scyTo_0004788
DAO domain-containing protein.
  
 
 0.707
scyTo_0005533
Uncharacterized protein.
  
 
 0.707
scyTo_0018680
DAO domain-containing protein.
  
 
 0.707
COQ3
Ubiquinone biosynthesis O-methyltransferase, mitochondrial; O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway; Belongs to the class I-like SAM-binding methyltransferase superfamily. UbiG/COQ3 family.
    
 0.689
scyTo_0012938
Uncharacterized protein.
  
 0.678
scyTo_0003628
Uncharacterized protein.
  
 0.678
scyTo_0019902
Uncharacterized protein.
  
 0.678
Your Current Organism:
Scyliorhinus torazame
NCBI taxonomy Id: 75743
Other names: S. torazame, cloudy catshark
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