Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SRP54 | scyTo_0004548 | A0A401PW53 | A0A401NTD5 | Signal recognition particle 54 kDa protein; Binds to the signal sequence of presecretory protein when they emerge from the ribosomes and transfers them to TRAM (translocating chain-associating membrane protein). Belongs to the GTP-binding SRP family. SRP54 subfamily. | SRP54 domain-containing protein. | 0.999 |
SRP54 | scyTo_0006994 | A0A401PW53 | A0A401NJW3 | Signal recognition particle 54 kDa protein; Binds to the signal sequence of presecretory protein when they emerge from the ribosomes and transfers them to TRAM (translocating chain-associating membrane protein). Belongs to the GTP-binding SRP family. SRP54 subfamily. | S4 RNA-binding domain-containing protein. | 0.989 |
SRP54 | scyTo_0010193 | A0A401PW53 | A0A401P1Q6 | Signal recognition particle 54 kDa protein; Binds to the signal sequence of presecretory protein when they emerge from the ribosomes and transfers them to TRAM (translocating chain-associating membrane protein). Belongs to the GTP-binding SRP family. SRP54 subfamily. | KOW domain-containing protein. | 0.994 |
SRP54 | scyTo_0014529 | A0A401PW53 | A0A401NP90 | Signal recognition particle 54 kDa protein; Binds to the signal sequence of presecretory protein when they emerge from the ribosomes and transfers them to TRAM (translocating chain-associating membrane protein). Belongs to the GTP-binding SRP family. SRP54 subfamily. | Plug_translocon domain-containing protein; Belongs to the SecY/SEC61-alpha family. | 0.989 |
SRP54 | scyTo_0014904 | A0A401PW53 | A0A401NXF5 | Signal recognition particle 54 kDa protein; Binds to the signal sequence of presecretory protein when they emerge from the ribosomes and transfers them to TRAM (translocating chain-associating membrane protein). Belongs to the GTP-binding SRP family. SRP54 subfamily. | Uncharacterized protein. | 0.994 |
SRP54 | scyTo_0015202 | A0A401PW53 | A0A401P511 | Signal recognition particle 54 kDa protein; Binds to the signal sequence of presecretory protein when they emerge from the ribosomes and transfers them to TRAM (translocating chain-associating membrane protein). Belongs to the GTP-binding SRP family. SRP54 subfamily. | Uncharacterized protein. | 0.999 |
SRP54 | scyTo_0016144 | A0A401PW53 | A0A401Q4H7 | Signal recognition particle 54 kDa protein; Binds to the signal sequence of presecretory protein when they emerge from the ribosomes and transfers them to TRAM (translocating chain-associating membrane protein). Belongs to the GTP-binding SRP family. SRP54 subfamily. | Signal recognition particle subunit SRP68; Signal-recognition-particle assembly has a crucial role in targeting secretory proteins to the rough endoplasmic reticulum membrane; Belongs to the SRP68 family. | 0.999 |
SRP54 | scyTo_0019314 | A0A401PW53 | A0A401PXE3 | Signal recognition particle 54 kDa protein; Binds to the signal sequence of presecretory protein when they emerge from the ribosomes and transfers them to TRAM (translocating chain-associating membrane protein). Belongs to the GTP-binding SRP family. SRP54 subfamily. | Uncharacterized protein. | 0.999 |
SRP54 | scyTo_0024099 | A0A401PW53 | A0A401QE85 | Signal recognition particle 54 kDa protein; Binds to the signal sequence of presecretory protein when they emerge from the ribosomes and transfers them to TRAM (translocating chain-associating membrane protein). Belongs to the GTP-binding SRP family. SRP54 subfamily. | Uncharacterized protein. | 0.999 |
SRP54 | scyTo_0024413 | A0A401PW53 | A0A401QED6 | Signal recognition particle 54 kDa protein; Binds to the signal sequence of presecretory protein when they emerge from the ribosomes and transfers them to TRAM (translocating chain-associating membrane protein). Belongs to the GTP-binding SRP family. SRP54 subfamily. | Uncharacterized protein; Belongs to the universal ribosomal protein uL14 family. | 0.995 |
scyTo_0004548 | SRP54 | A0A401NTD5 | A0A401PW53 | SRP54 domain-containing protein. | Signal recognition particle 54 kDa protein; Binds to the signal sequence of presecretory protein when they emerge from the ribosomes and transfers them to TRAM (translocating chain-associating membrane protein). Belongs to the GTP-binding SRP family. SRP54 subfamily. | 0.999 |
scyTo_0004548 | scyTo_0006994 | A0A401NTD5 | A0A401NJW3 | SRP54 domain-containing protein. | S4 RNA-binding domain-containing protein. | 0.598 |
scyTo_0004548 | scyTo_0010193 | A0A401NTD5 | A0A401P1Q6 | SRP54 domain-containing protein. | KOW domain-containing protein. | 0.964 |
scyTo_0004548 | scyTo_0014529 | A0A401NTD5 | A0A401NP90 | SRP54 domain-containing protein. | Plug_translocon domain-containing protein; Belongs to the SecY/SEC61-alpha family. | 0.991 |
scyTo_0004548 | scyTo_0014904 | A0A401NTD5 | A0A401NXF5 | SRP54 domain-containing protein. | Uncharacterized protein. | 0.968 |
scyTo_0004548 | scyTo_0015202 | A0A401NTD5 | A0A401P511 | SRP54 domain-containing protein. | Uncharacterized protein. | 0.974 |
scyTo_0004548 | scyTo_0016144 | A0A401NTD5 | A0A401Q4H7 | SRP54 domain-containing protein. | Signal recognition particle subunit SRP68; Signal-recognition-particle assembly has a crucial role in targeting secretory proteins to the rough endoplasmic reticulum membrane; Belongs to the SRP68 family. | 0.983 |
scyTo_0004548 | scyTo_0019314 | A0A401NTD5 | A0A401PXE3 | SRP54 domain-containing protein. | Uncharacterized protein. | 0.962 |
scyTo_0004548 | scyTo_0024099 | A0A401NTD5 | A0A401QE85 | SRP54 domain-containing protein. | Uncharacterized protein. | 0.968 |
scyTo_0004548 | scyTo_0024413 | A0A401NTD5 | A0A401QED6 | SRP54 domain-containing protein. | Uncharacterized protein; Belongs to the universal ribosomal protein uL14 family. | 0.974 |
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