STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
scyTo_0017750Cul7 domain-containing protein. (468 aa)    
Predicted Functional Partners:
scyTo_0020294
Uncharacterized protein.
 
     0.940
scyTo_0016169
Uncharacterized protein; Belongs to the cullin family.
 
     0.939
scyTo_0022421
RING-type domain-containing protein.
 
     0.921
scyTo_0024185
RING-type domain-containing protein.
 
      0.900
scyTo_0014157
RING-type domain-containing protein.
    
 0.888
scyTo_0007086
UBIQUITIN_CONJUGAT_2 domain-containing protein.
    
 0.771
scyTo_0016068
UEV domain-containing protein.
   
 0.729
scyTo_0022768
Uncharacterized protein; Belongs to the LDH/MDH superfamily.
   
 0.729
scyTo_0003048
Ubiquitin-like domain-containing protein.
    
  0.724
scyTo_0017775
Ubiquitin-like domain-containing protein.
    
  0.724
Your Current Organism:
Scyliorhinus torazame
NCBI taxonomy Id: 75743
Other names: S. torazame, cloudy catshark
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.