Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
scyTo_0000717 | scyTo_0001182 | A0A401P2N1 | A0A401PAE7 | Vacuolar-sorting protein SNF8; Component of the endosomal sorting complex required for transport II (ESCRT-II), which is required for multivesicular body (MVB) formation and sorting of endosomal cargo proteins into MVBs. Belongs to the SNF8 family. | Uncharacterized protein. | 0.999 |
scyTo_0000717 | scyTo_0002948 | A0A401P2N1 | A0A401PL50 | Vacuolar-sorting protein SNF8; Component of the endosomal sorting complex required for transport II (ESCRT-II), which is required for multivesicular body (MVB) formation and sorting of endosomal cargo proteins into MVBs. Belongs to the SNF8 family. | VPS37 C-terminal domain-containing protein. | 0.848 |
scyTo_0000717 | scyTo_0003164 | A0A401P2N1 | A0A401PLT5 | Vacuolar-sorting protein SNF8; Component of the endosomal sorting complex required for transport II (ESCRT-II), which is required for multivesicular body (MVB) formation and sorting of endosomal cargo proteins into MVBs. Belongs to the SNF8 family. | VPS37 C-terminal domain-containing protein. | 0.850 |
scyTo_0000717 | scyTo_0005958 | A0A401P2N1 | A0A401PEG1 | Vacuolar-sorting protein SNF8; Component of the endosomal sorting complex required for transport II (ESCRT-II), which is required for multivesicular body (MVB) formation and sorting of endosomal cargo proteins into MVBs. Belongs to the SNF8 family. | Uncharacterized protein. | 0.897 |
scyTo_0000717 | scyTo_0012662 | A0A401P2N1 | A0A401NGI4 | Vacuolar-sorting protein SNF8; Component of the endosomal sorting complex required for transport II (ESCRT-II), which is required for multivesicular body (MVB) formation and sorting of endosomal cargo proteins into MVBs. Belongs to the SNF8 family. | MABP domain-containing protein. | 0.833 |
scyTo_0000717 | scyTo_0013165 | A0A401P2N1 | A0A401NQM4 | Vacuolar-sorting protein SNF8; Component of the endosomal sorting complex required for transport II (ESCRT-II), which is required for multivesicular body (MVB) formation and sorting of endosomal cargo proteins into MVBs. Belongs to the SNF8 family. | GLUE N-terminal domain-containing protein. | 0.999 |
scyTo_0000717 | scyTo_0013701 | A0A401P2N1 | A0A401P2X9 | Vacuolar-sorting protein SNF8; Component of the endosomal sorting complex required for transport II (ESCRT-II), which is required for multivesicular body (MVB) formation and sorting of endosomal cargo proteins into MVBs. Belongs to the SNF8 family. | VPS37 C-terminal domain-containing protein. | 0.910 |
scyTo_0000717 | scyTo_0017762 | A0A401P2N1 | A0A401PZU8 | Vacuolar-sorting protein SNF8; Component of the endosomal sorting complex required for transport II (ESCRT-II), which is required for multivesicular body (MVB) formation and sorting of endosomal cargo proteins into MVBs. Belongs to the SNF8 family. | UBA domain-containing protein. | 0.645 |
scyTo_0000717 | scyTo_0024225 | A0A401P2N1 | A0A401QDW1 | Vacuolar-sorting protein SNF8; Component of the endosomal sorting complex required for transport II (ESCRT-II), which is required for multivesicular body (MVB) formation and sorting of endosomal cargo proteins into MVBs. Belongs to the SNF8 family. | MABP domain-containing protein. | 0.833 |
scyTo_0001182 | scyTo_0000717 | A0A401PAE7 | A0A401P2N1 | Uncharacterized protein. | Vacuolar-sorting protein SNF8; Component of the endosomal sorting complex required for transport II (ESCRT-II), which is required for multivesicular body (MVB) formation and sorting of endosomal cargo proteins into MVBs. Belongs to the SNF8 family. | 0.999 |
scyTo_0001182 | scyTo_0002948 | A0A401PAE7 | A0A401PL50 | Uncharacterized protein. | VPS37 C-terminal domain-containing protein. | 0.916 |
scyTo_0001182 | scyTo_0003164 | A0A401PAE7 | A0A401PLT5 | Uncharacterized protein. | VPS37 C-terminal domain-containing protein. | 0.927 |
scyTo_0001182 | scyTo_0005958 | A0A401PAE7 | A0A401PEG1 | Uncharacterized protein. | Uncharacterized protein. | 0.929 |
scyTo_0001182 | scyTo_0012662 | A0A401PAE7 | A0A401NGI4 | Uncharacterized protein. | MABP domain-containing protein. | 0.896 |
scyTo_0001182 | scyTo_0013165 | A0A401PAE7 | A0A401NQM4 | Uncharacterized protein. | GLUE N-terminal domain-containing protein. | 0.999 |
scyTo_0001182 | scyTo_0013701 | A0A401PAE7 | A0A401P2X9 | Uncharacterized protein. | VPS37 C-terminal domain-containing protein. | 0.948 |
scyTo_0001182 | scyTo_0017762 | A0A401PAE7 | A0A401PZU8 | Uncharacterized protein. | UBA domain-containing protein. | 0.645 |
scyTo_0001182 | scyTo_0024225 | A0A401PAE7 | A0A401QDW1 | Uncharacterized protein. | MABP domain-containing protein. | 0.896 |
scyTo_0002948 | scyTo_0000717 | A0A401PL50 | A0A401P2N1 | VPS37 C-terminal domain-containing protein. | Vacuolar-sorting protein SNF8; Component of the endosomal sorting complex required for transport II (ESCRT-II), which is required for multivesicular body (MVB) formation and sorting of endosomal cargo proteins into MVBs. Belongs to the SNF8 family. | 0.848 |
scyTo_0002948 | scyTo_0001182 | A0A401PL50 | A0A401PAE7 | VPS37 C-terminal domain-containing protein. | Uncharacterized protein. | 0.916 |
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