STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
scyTo_0017762UBA domain-containing protein. (78 aa)    
Predicted Functional Partners:
scyTo_0013165
GLUE N-terminal domain-containing protein.
     
  0.645
scyTo_0000717
Vacuolar-sorting protein SNF8; Component of the endosomal sorting complex required for transport II (ESCRT-II), which is required for multivesicular body (MVB) formation and sorting of endosomal cargo proteins into MVBs. Belongs to the SNF8 family.
     
  0.645
scyTo_0001182
Uncharacterized protein.
     
  0.645
scyTo_0005958
Uncharacterized protein.
     
  0.558
scyTo_0013701
VPS37 C-terminal domain-containing protein.
     
  0.542
scyTo_0002948
VPS37 C-terminal domain-containing protein.
     
  0.542
scyTo_0003164
VPS37 C-terminal domain-containing protein.
     
  0.542
scyTo_0012662
MABP domain-containing protein.
     
  0.518
scyTo_0024225
MABP domain-containing protein.
     
  0.518
Your Current Organism:
Scyliorhinus torazame
NCBI taxonomy Id: 75743
Other names: S. torazame, cloudy catshark
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