STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
scyTo_0018660HTH myb-type domain-containing protein. (257 aa)    
Predicted Functional Partners:
scyTo_0012187
Uncharacterized protein.
    
 0.984
scyTo_0016976
TINF2_N domain-containing protein.
    
 0.982
scyTo_0022694
Uncharacterized protein.
    
 
 0.982
scyTo_0025530
Uncharacterized protein.
    
 0.982
scyTo_0002064
Telo_bind domain-containing protein.
    
 0.981
scyTo_0001570
Uncharacterized protein.
    
 0.968
scyTo_0017812
Uncharacterized protein.
    
 
 0.968
scyTo_0012480
Poly [ADP-ribose] polymerase.
    
 
 0.906
scyTo_0015030
Uncharacterized protein.
    
 
 0.879
scyTo_0011033
Telomerase reverse transcriptase; Telomerase is a ribonucleoprotein enzyme essential for the replication of chromosome termini in most eukaryotes. It elongates telomeres. It is a reverse transcriptase that adds simple sequence repeats to chromosome ends by copying a template sequence within the RNA component of the enzyme.
    
 0.849
Your Current Organism:
Scyliorhinus torazame
NCBI taxonomy Id: 75743
Other names: S. torazame, cloudy catshark
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