STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
scyTo_0017884Uncharacterized protein. (305 aa)    
Predicted Functional Partners:
scyTo_0002921
Uncharacterized protein.
    
 
 0.916
scyTo_0013582
Nup214_FG domain-containing protein.
    
 
 0.850
scyTo_0022998
Uncharacterized protein.
    
 
 0.850
scyTo_0019481
Uncharacterized protein.
  
 0.824
scyTo_0008369
MIF4G domain-containing protein.
    
   0.806
scyTo_0018386
Uncharacterized protein.
    
 
 0.792
scyTo_0020083
Uncharacterized protein.
  
 0.769
scyTo_0006715
Uncharacterized protein; Belongs to the DEAD box helicase family.
  
 
 0.746
scyTo_0007459
MIF4G domain-containing protein.
    
   0.728
scyTo_0016301
Uncharacterized protein.
    
   0.728
Your Current Organism:
Scyliorhinus torazame
NCBI taxonomy Id: 75743
Other names: S. torazame, cloudy catshark
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