STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
scyTo_0016983PA2c domain-containing protein. (580 aa)    
Predicted Functional Partners:
scyTo_0002200
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
    
  0.906
scyTo_0003911
RAG2_PHD domain-containing protein.
   
 0.860
scyTo_0001382
Uncharacterized protein; Belongs to the complex I LYR family.
    
 0.837
scyTo_0027486
Uncharacterized protein.
    
 0.837
scyTo_0008012
Uncharacterized protein.
     
 0.831
scyTo_0005763
Uncharacterized protein; Belongs to the cytochrome P450 family.
    
 0.820
scyTo_0017171
Uncharacterized protein.
     
 0.819
scyTo_0005159
Uncharacterized protein.
     
 0.818
scyTo_0012674
Phospholipase A(2).
     
 0.817
scyTo_0005970
Uncharacterized protein.
     
 0.814
Your Current Organism:
Scyliorhinus torazame
NCBI taxonomy Id: 75743
Other names: S. torazame, cloudy catshark
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.