STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
scyTo_0016980MG3 domain-containing protein. (126 aa)    
Predicted Functional Partners:
scyTo_0001992
Chromo domain-containing protein.
    
 0.823
scyTo_0014341
Uncharacterized protein; Belongs to the peptidase S1 family.
   
 0.752
scyTo_0001592
MACPF domain-containing protein.
   
 0.740
scyTo_0004983
Uncharacterized protein.
   
 0.731
scyTo_0022767
Uncharacterized protein.
   
 0.731
scyTo_0021606
MACPF domain-containing protein.
   
 0.731
scyTo_0001512
Uncharacterized protein.
   
 0.723
scyTo_0012219
RING-type domain-containing protein.
    
 0.722
scyTo_0003144
RING-type domain-containing protein.
    
 0.722
scyTo_0000809
RING-type domain-containing protein.
    
 0.721
Your Current Organism:
Scyliorhinus torazame
NCBI taxonomy Id: 75743
Other names: S. torazame, cloudy catshark
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.