STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
scyTo_0017077CTLH domain-containing protein. (928 aa)    
Predicted Functional Partners:
scyTo_0002622
Uncharacterized protein.
   
 
 0.954
scyTo_0018293
Uncharacterized protein.
    
 
 0.949
scyTo_0010787
Uncharacterized protein.
   
 
 0.929
scyTo_0022902
Uncharacterized protein.
   
 
 0.929
scyTo_0010663
Uncharacterized protein.
   
 
 0.904
scyTo_0016170
Uncharacterized protein.
   
 
 0.904
scyTo_0011331
Uncharacterized protein.
 
      0.893
scyTo_0007486
Uncharacterized protein.
   
 
 0.867
scyTo_0008605
Uncharacterized protein.
   
 
 0.867
scyTo_0003739
LisH domain-containing protein.
    
 
 0.817
Your Current Organism:
Scyliorhinus torazame
NCBI taxonomy Id: 75743
Other names: S. torazame, cloudy catshark
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.