STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
scyTo_0023366GYF domain-containing protein. (69 aa)    
Predicted Functional Partners:
scyTo_0004449
Uncharacterized protein.
   
 
 0.955
scyTo_0002126
MPN domain-containing protein.
    
 
 0.950
scyTo_0001472
Uncharacterized protein.
   
 
 0.945
scyTo_0027329
Uncharacterized protein.
   
 
 0.941
scyTo_0004722
Tr-type G domain-containing protein.
    
 
 0.927
scyTo_0002531
Uncharacterized protein.
   
 
 0.875
scyTo_0012812
Small nuclear ribonucleoprotein-associated protein.
    
 
 0.836
scyTo_0006754
Uncharacterized protein.
    
 
 0.836
scyTo_0025613
Small nuclear ribonucleoprotein-associated protein.
    
 
 0.836
scyTo_0013389
Thioredoxin-like protein; Plays role in pre-mRNA splicing. Belongs to the DIM1 family.
    
 
 0.828
Your Current Organism:
Scyliorhinus torazame
NCBI taxonomy Id: 75743
Other names: S. torazame, cloudy catshark
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.