STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
scyTo_0024307Uncharacterized protein. (84 aa)    
Predicted Functional Partners:
scyTo_0001496
Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting.
   
 0.988
scyTo_0012571
Vacuolar protein sorting-associated protein 29; Acts as component of the retromer cargo-selective complex (CSC). The CSC is believed to be the core functional component of retromer or respective retromer complex variants acting to prevent missorting of selected transmembrane cargo proteins into the lysosomal degradation pathway.
   
 0.976
scyTo_0003095
Uncharacterized protein.
    
0.957
scyTo_0013957
PX domain-containing protein.
    
 0.938
scyTo_0006280
PX domain-containing protein.
    
 0.938
scyTo_0011576
Uncharacterized protein.
   
 
 0.872
scyTo_0006313
PX domain-containing protein.
    
 0.870
scyTo_0017305
PX domain-containing protein.
    
 0.870
scyTo_0021602
Uncharacterized protein.
    
 0.870
scyTo_0008667
PX domain-containing protein.
   
 
 0.857
Your Current Organism:
Scyliorhinus torazame
NCBI taxonomy Id: 75743
Other names: S. torazame, cloudy catshark
Server load: low (24%) [HD]