STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
scyTo_0024754Saposin B-type domain-containing protein. (104 aa)    
Predicted Functional Partners:
scyTo_0008902
G_PROTEIN_RECEP_F1_2 domain-containing protein.
     
 0.816
scyTo_0011947
Glyco_hydro_59M domain-containing protein.
    
 
 0.808
scyTo_0018201
Glucosylceramidase.
   
 0.715
scyTo_0015807
PKD domain-containing protein.
   
 0.715
scyTo_0002065
G_PROTEIN_RECEP_F1_2 domain-containing protein.
     
 0.702
scyTo_0012785
V-ATPase_H_C domain-containing protein.
   
 
  0.627
scyTo_0009123
Pept_C1 domain-containing protein; Belongs to the peptidase C1 family.
   
 
 0.609
scyTo_0006495
Uncharacterized protein.
     
 0.599
scyTo_0014127
G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family.
     
 0.578
scyTo_0005500
Pept_C1 domain-containing protein; Belongs to the peptidase C1 family.
   
 
 0.574
Your Current Organism:
Scyliorhinus torazame
NCBI taxonomy Id: 75743
Other names: S. torazame, cloudy catshark
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