STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
scyTo_0025460Uncharacterized protein. (44 aa)    
Predicted Functional Partners:
scyTo_0010511
Uncharacterized protein; Belongs to the peptidase C14A family.
    
 0.943
scyTo_0013318
Uncharacterized protein; Belongs to the peptidase C14A family.
    
 0.934
scyTo_0019409
Uncharacterized protein; Belongs to the peptidase C14A family.
    
 0.934
scyTo_0010218
Uncharacterized protein; Belongs to the peptidase C14A family.
    
 0.916
scyTo_0018437
Poly [ADP-ribose] polymerase.
    
 0.913
scyTo_0004345
Uncharacterized protein.
   
 0.897
scyTo_0006859
DNA polymerase; DNA polymerase that functions in several pathways of DNA repair. Involved in base excision repair (BER) responsible for repair of lesions that give rise to abasic (AP) sites in DNA. Also contributes to DNA double-strand break repair by non-homologous end joining and homologous recombination. Has both template-dependent and template- independent (terminal transferase) DNA polymerase activities. Has also a 5'-deoxyribose-5-phosphate lyase (dRP lyase) activity.
    
 0.887
scyTo_0008714
Uncharacterized protein.
    
 
 0.840
scyTo_0024336
WWE domain-containing protein.
   
 0.832
scyTo_0023739
Uncharacterized protein.
   
 
 0.831
Your Current Organism:
Scyliorhinus torazame
NCBI taxonomy Id: 75743
Other names: S. torazame, cloudy catshark
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.