STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
scyTo_0025781Uncharacterized protein. (484 aa)    
Predicted Functional Partners:
scyTo_0024045
Uncharacterized protein.
   
 0.877
scyTo_0012839
Uncharacterized protein.
    
 0.756
scyTo_0014118
GRASP55_65 domain-containing protein.
    
 0.720
scyTo_0019074
GRASP55_65 domain-containing protein.
    
 0.720
scyTo_0016533
GRASP55_65 domain-containing protein.
    
 0.720
scyTo_0020084
GOLD domain-containing protein.
    
  0.622
scyTo_0008818
Uncharacterized protein; Involved in transport of proteins from the cis/medial-Golgi to the trans-Golgi network.
     
 0.557
scyTo_0011807
F-actin-capping protein subunit beta; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.
    
 0.548
scyTo_0012249
Uncharacterized protein.
    
  0.531
scyTo_0009450
Uncharacterized protein.
    
 0.511
Your Current Organism:
Scyliorhinus torazame
NCBI taxonomy Id: 75743
Other names: S. torazame, cloudy catshark
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