STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
scyTo_0026241ERCC4 domain-containing protein. (100 aa)    
Predicted Functional Partners:
scyTo_0013060
ERCC4 domain-containing protein.
   
 0.998
scyTo_0002566
ERCC4 domain-containing protein.
    
 0.998
scyTo_0018644
Helicase C-terminal domain-containing protein.
    
 0.998
scyTo_0018666
Helicase ATP-binding domain-containing protein.
    
 0.998
scyTo_0012600
3'-5' exonuclease domain-containing protein.
   
 0.997
scyTo_0013838
Uncharacterized protein.
   
 0.997
scyTo_0014753
BTB domain-containing protein.
  
 0.996
scyTo_0009166
DNA repair protein RAD51 homolog; Plays an important role in homologous strand exchange, a key step in DNA repair through homologous recombination. Binds to single and double-stranded DNA and exhibits DNA-dependent ATPase activity. Catalyzes the recognition of homology and strand exchange between homologous DNA partners to form a joint molecule between a processed DNA break and the repair template. Binds to single-stranded DNA in an ATP-dependent manner to form nucleoprotein filaments which are essential for the homology search and strand exchange. Belongs to the RecA family. RAD51 sub [...]
   
 0.989
scyTo_0001651
ERCC4 domain-containing protein.
    
 0.984
scyTo_0016975
Uncharacterized protein.
   
 0.984
Your Current Organism:
Scyliorhinus torazame
NCBI taxonomy Id: 75743
Other names: S. torazame, cloudy catshark
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.