Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
D3M82_06910 | NCTC8284_02670 | GCA_000730685_00117 | GCA_000730685_00116 | Unannotated protein. | Unannotated protein. | 0.733 |
D3M82_06910 | NCTC8284_02673 | GCA_000730685_00117 | GCA_000730685_00118 | Unannotated protein. | Unannotated protein. | 0.793 |
D3M82_06910 | NCTC8284_02674 | GCA_000730685_00117 | GCA_000730685_00119 | Unannotated protein. | Unannotated protein. | 0.793 |
D3M82_06910 | degS | GCA_000730685_00117 | GCA_000730685_00112 | Unannotated protein. | Unannotated protein. | 0.450 |
D3M82_06910 | nrdR_2 | GCA_000730685_00117 | GCA_000730685_00114 | Unannotated protein. | Unannotated protein; Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes; Belongs to the NrdR family. | 0.450 |
D3M82_06910 | recC_1 | GCA_000730685_00117 | GCA_000730685_00115 | Unannotated protein. | Unannotated protein. | 0.567 |
D3M82_06910 | ribD | GCA_000730685_00117 | GCA_000730685_00113 | Unannotated protein. | Unannotated protein; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family. | 0.451 |
D3M82_06910 | suhB | GCA_000730685_00117 | GCA_000730685_00120 | Unannotated protein. | Unannotated protein; Belongs to the inositol monophosphatase superfamily. | 0.519 |
D3M82_06910 | yfbR_1 | GCA_000730685_00117 | GCA_000730685_00111 | Unannotated protein. | Unannotated protein. | 0.450 |
NCTC8284_02670 | D3M82_06910 | GCA_000730685_00116 | GCA_000730685_00117 | Unannotated protein. | Unannotated protein. | 0.733 |
NCTC8284_02670 | NCTC8284_02673 | GCA_000730685_00116 | GCA_000730685_00118 | Unannotated protein. | Unannotated protein. | 0.735 |
NCTC8284_02670 | NCTC8284_02674 | GCA_000730685_00116 | GCA_000730685_00119 | Unannotated protein. | Unannotated protein. | 0.735 |
NCTC8284_02670 | degS | GCA_000730685_00116 | GCA_000730685_00112 | Unannotated protein. | Unannotated protein. | 0.485 |
NCTC8284_02670 | nrdR_2 | GCA_000730685_00116 | GCA_000730685_00114 | Unannotated protein. | Unannotated protein; Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes; Belongs to the NrdR family. | 0.485 |
NCTC8284_02670 | recC_1 | GCA_000730685_00116 | GCA_000730685_00115 | Unannotated protein. | Unannotated protein. | 0.615 |
NCTC8284_02670 | ribD | GCA_000730685_00116 | GCA_000730685_00113 | Unannotated protein. | Unannotated protein; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family. | 0.486 |
NCTC8284_02670 | suhB | GCA_000730685_00116 | GCA_000730685_00120 | Unannotated protein. | Unannotated protein; Belongs to the inositol monophosphatase superfamily. | 0.481 |
NCTC8284_02670 | yfbR_1 | GCA_000730685_00116 | GCA_000730685_00111 | Unannotated protein. | Unannotated protein. | 0.485 |
NCTC8284_02673 | D3M82_06910 | GCA_000730685_00118 | GCA_000730685_00117 | Unannotated protein. | Unannotated protein. | 0.793 |
NCTC8284_02673 | NCTC8284_02670 | GCA_000730685_00118 | GCA_000730685_00116 | Unannotated protein. | Unannotated protein. | 0.735 |
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