STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B1R94_27770Hypothetical protein; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B. (580 aa)    
Predicted Functional Partners:
AQT79686.1
Cytochrome C oxidase subunit II; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.999
AQT79693.1
Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.999
AQT79690.1
Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.998
AQT79553.1
Cytochrome C oxidase subunit III; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.997
ctaB
Protoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group.
 
 0.997
AQT79691.1
Menaquinol-cytochrome C reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.996
AQT79692.1
Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.990
AQT79687.1
Cytochrome C oxidase subunit IV; Part of cytochrome c oxidase, its function is unknown. Belongs to the cytochrome c oxidase bacterial subunit CtaF family.
 
 
 0.987
AQT79401.1
DUF5130 domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.975
AQT80771.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
   0.975
Your Current Organism:
Mycolicibacterium litorale
NCBI taxonomy Id: 758802
Other names: CGMCC 4.5724, DSM 45785, JCM 17423, M. litorale, Mycobacterium litorale, Mycobacterium litorale Zhang et al. 2012, Mycobacterium sp. F4, Mycolicibacterium litorale (Zhang et al. 2012) Gupta et al. 2018, strain F4
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