STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHI66382.1Phosphotransferase enzyme family protein. (331 aa)    
Predicted Functional Partners:
SHI66341.1
Hypothetical protein.
       0.727
SHJ66841.1
Concanavalin A-like lectin/glucanases superfamily protein.
  
     0.596
SHK76496.1
Concanavalin A-like lectin/glucanases superfamily protein.
  
     0.579
SHK38930.1
Concanavalin A-like lectin/glucanases superfamily protein.
  
     0.568
SHI54442.1
FHA domain-containing protein.
  
     0.563
SHK76461.1
RHS repeat-associated core domain-containing protein.
  
     0.525
SHK55837.1
Methanogenic corrinoid protein MtbC1.
  
     0.514
SHK38898.1
Intein C-terminal splicing region/RHS repeat-associated core domain-containing protein.
  
     0.508
SHI57207.1
Hypothetical protein.
  
     0.507
SHK89032.1
Right handed beta helix region.
  
     0.504
Your Current Organism:
Nocardiopsis flavescens
NCBI taxonomy Id: 758803
Other names: CGMCC 4.5723, JCM 17424, N. flavescens, Nocardiopsis flavescens Fang et al. 2011, Nocardiopsis sp. SA6, strain SA6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.