STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHJ45180.1Acetyltransferase (GNAT) family protein. (144 aa)    
Predicted Functional Partners:
SHJ45153.1
malonyl-CoA/methylmalonyl-CoA synthetase.
       0.773
argG
Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 2 subfamily.
  
  
 0.552
SHJ45124.1
CBS domain-containing protein.
       0.524
SHJ43917.1
Iron complex transport system substrate-binding protein.
  
     0.510
SHJ34486.1
Kanamycin kinase/aminoglycoside 3'-phosphotransferase-2; Belongs to the aminoglycoside phosphotransferase family.
  
     0.444
SHJ68183.1
ABC-type glycerol-3-phosphate transport system, substrate-binding protein.
  
     0.438
SHI62538.1
FAD dependent oxidoreductase.
  
     0.437
SHJ42096.1
Acetyltransferase (GNAT) family protein.
  
     0.437
SHJ25417.1
Glutamate synthase (NADPH/NADH) large chain.
     
 0.428
SHJ68214.1
Beta-galactosidase trimerisation domain-containing protein.
  
     0.428
Your Current Organism:
Nocardiopsis flavescens
NCBI taxonomy Id: 758803
Other names: CGMCC 4.5723, JCM 17424, N. flavescens, Nocardiopsis flavescens Fang et al. 2011, Nocardiopsis sp. SA6, strain SA6
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