STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHJ66002.1Sugar kinase of the NBD/HSP70 family, may contain an N-terminal HTH domain. (396 aa)    
Predicted Functional Partners:
SHK20649.1
Sugar kinase of the NBD/HSP70 family, may contain an N-terminal HTH domain.
  
     0.772
SHI81814.1
Sugar kinase of the NBD/HSP70 family, may contain an N-terminal HTH domain.
  
     0.741
SHJ66036.1
Sugar-phosphatase.
 
     0.623
SHK93870.1
PTS system, N-acetylglucosamine-specific IIC component.
    
   0.615
SHK93938.1
PTS system, N-acetylglucosamine-specific IIB component.
    
   0.615
xylB
Xylulokinase.
 
   
 0.404
Your Current Organism:
Nocardiopsis flavescens
NCBI taxonomy Id: 758803
Other names: CGMCC 4.5723, JCM 17424, N. flavescens, Nocardiopsis flavescens Fang et al. 2011, Nocardiopsis sp. SA6, strain SA6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.