STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHK25738.1Iron complex transport system substrate-binding protein. (332 aa)    
Predicted Functional Partners:
SHJ69236.1
Bifunctional isochorismate lyase / aryl carrier protein.
 
  
 0.961
SHJ69173.1
Amino acid adenylation domain-containing protein.
 
  
 0.949
SHJ42337.1
Amino acid adenylation domain-containing protein.
 
  
 0.874
SHJ91264.1
Nonribosomal peptide synthetase DhbF.
 
  
 0.869
SHJ91239.1
Pristinamycin I synthase-3 and 4.
 
  
 0.864
SHJ69146.1
Pyochelin synthetase.
 
  
 0.861
SHI46479.1
Iron complex transport system ATP-binding protein.
 
    0.797
SHK05222.1
Iron complex transport system ATP-binding protein.
 
    0.797
SHJ42515.1
2,3-dihydroxybenzoate-AMP ligase.
 
    0.795
SHK84811.1
Iron complex transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
  
 0.794
Your Current Organism:
Nocardiopsis flavescens
NCBI taxonomy Id: 758803
Other names: CGMCC 4.5723, JCM 17424, N. flavescens, Nocardiopsis flavescens Fang et al. 2011, Nocardiopsis sp. SA6, strain SA6
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.