STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHK36367.1Anion-transporting ATPase, ArsA/GET3 family. (376 aa)    
Predicted Functional Partners:
SHK36402.1
Anion-transporting ATPase, ArsA/GET3 family.
 
 
   0.986
purD
Phosphoribosylamine--glycine ligase; Belongs to the GARS family.
      
 0.769
SHK23600.1
UDP-glucose 4-epimerase.
  
     0.761
SHK24124.1
Putative sensory transduction regulator.
  
     0.737
SHJ49530.1
Transcriptional regulatory protein, C terminal.
  
 
  0.733
SHK16306.1
Hypothetical protein.
  
 
  0.724
SHK36537.1
Glyoxylase, beta-lactamase superfamily II.
 
     0.722
SHK52006.1
Citrate lyase subunit beta / citryl-CoA lyase; Belongs to the HpcH/HpaI aldolase family.
      
 0.715
SHI52194.1
Protein of unknown function DUF58.
      
 0.708
SHI96343.1
Uncharacterized conserved protein, DUF58 family, contains vWF domain.
      
 0.707
Your Current Organism:
Nocardiopsis flavescens
NCBI taxonomy Id: 758803
Other names: CGMCC 4.5723, JCM 17424, N. flavescens, Nocardiopsis flavescens Fang et al. 2011, Nocardiopsis sp. SA6, strain SA6
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