SHK75473.1 protein (Nocardiopsis flavescens)

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Score

SHK75473.1

RNA polymerase sigma-70 factor, ECF subfamily. (200 aa)

Predicted Functional Partners:

SHK75442.1

0.986

SHK67415.1

0.918

SHK18184.1

0.773

SHK07051.1

0.767

SHK62015.1

0.756

SHK64833.1

0.672

SHJ75400.1

0.645

rpoB

0.615

rpoC

0.615

rpoA

0.615

Your Current Organism:

Nocardiopsis flavescens

NCBI taxonomy Id: 758803
Other names: CGMCC 4.5723, JCM 17424, N. flavescens, Nocardiopsis flavescens Fang et al. 2011, Nocardiopsis sp. SA6, strain SA6

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
SHJ75400.1	SHK07051.1	SAMN05421803_10982	SAMN05421803_11372	RNA polymerase sigma-70 factor, sigma-E family; Belongs to the sigma-70 factor family. ECF subfamily.	RNA polymerase sigma-70 factor, ECF subfamily.	0.527
SHJ75400.1	SHK18184.1	SAMN05421803_10982	SAMN05421803_11512	RNA polymerase sigma-70 factor, sigma-E family; Belongs to the sigma-70 factor family. ECF subfamily.	RNA polymerase sigma-70 factor, ECF subfamily.	0.685
SHJ75400.1	SHK62015.1	SAMN05421803_10982	SAMN05421803_12539	RNA polymerase sigma-70 factor, sigma-E family; Belongs to the sigma-70 factor family. ECF subfamily.	RNA polymerase sigma-70 factor, ECF subfamily.	0.677
SHJ75400.1	SHK64833.1	SAMN05421803_10982	SAMN05421803_12645	RNA polymerase sigma-70 factor, sigma-E family; Belongs to the sigma-70 factor family. ECF subfamily.	RNA polymerase sigma-70 factor, ECF subfamily.	0.568
SHJ75400.1	SHK67415.1	SAMN05421803_10982	SAMN05421803_12750	RNA polymerase sigma-70 factor, sigma-E family; Belongs to the sigma-70 factor family. ECF subfamily.	Putative zinc-finger.	0.531
SHJ75400.1	SHK75442.1	SAMN05421803_10982	SAMN05421803_13121	RNA polymerase sigma-70 factor, sigma-E family; Belongs to the sigma-70 factor family. ECF subfamily.	Putative zinc-finger.	0.531
SHJ75400.1	SHK75473.1	SAMN05421803_10982	SAMN05421803_13122	RNA polymerase sigma-70 factor, sigma-E family; Belongs to the sigma-70 factor family. ECF subfamily.	RNA polymerase sigma-70 factor, ECF subfamily.	0.645
SHJ75400.1	rpoA	SAMN05421803_10982	SAMN05421803_12073	RNA polymerase sigma-70 factor, sigma-E family; Belongs to the sigma-70 factor family. ECF subfamily.	DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.612
SHJ75400.1	rpoB	SAMN05421803_10982	SAMN05421803_12037	RNA polymerase sigma-70 factor, sigma-E family; Belongs to the sigma-70 factor family. ECF subfamily.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.615
SHJ75400.1	rpoC	SAMN05421803_10982	SAMN05421803_12038	RNA polymerase sigma-70 factor, sigma-E family; Belongs to the sigma-70 factor family. ECF subfamily.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.615
SHK07051.1	SHJ75400.1	SAMN05421803_11372	SAMN05421803_10982	RNA polymerase sigma-70 factor, ECF subfamily.	RNA polymerase sigma-70 factor, sigma-E family; Belongs to the sigma-70 factor family. ECF subfamily.	0.527
SHK07051.1	SHK18184.1	SAMN05421803_11372	SAMN05421803_11512	RNA polymerase sigma-70 factor, ECF subfamily.	RNA polymerase sigma-70 factor, ECF subfamily.	0.770
SHK07051.1	SHK62015.1	SAMN05421803_11372	SAMN05421803_12539	RNA polymerase sigma-70 factor, ECF subfamily.	RNA polymerase sigma-70 factor, ECF subfamily.	0.763
SHK07051.1	SHK64833.1	SAMN05421803_11372	SAMN05421803_12645	RNA polymerase sigma-70 factor, ECF subfamily.	RNA polymerase sigma-70 factor, ECF subfamily.	0.732
SHK07051.1	SHK67415.1	SAMN05421803_11372	SAMN05421803_12750	RNA polymerase sigma-70 factor, ECF subfamily.	Putative zinc-finger.	0.531
SHK07051.1	SHK75442.1	SAMN05421803_11372	SAMN05421803_13121	RNA polymerase sigma-70 factor, ECF subfamily.	Putative zinc-finger.	0.531
SHK07051.1	SHK75473.1	SAMN05421803_11372	SAMN05421803_13122	RNA polymerase sigma-70 factor, ECF subfamily.	RNA polymerase sigma-70 factor, ECF subfamily.	0.767
SHK07051.1	rpoA	SAMN05421803_11372	SAMN05421803_12073	RNA polymerase sigma-70 factor, ECF subfamily.	DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.612
SHK07051.1	rpoB	SAMN05421803_11372	SAMN05421803_12037	RNA polymerase sigma-70 factor, ECF subfamily.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.615
SHK07051.1	rpoC	SAMN05421803_11372	SAMN05421803_12038	RNA polymerase sigma-70 factor, ECF subfamily.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.615