SHK85213.1 protein (Nocardiopsis flavescens)

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Predicted Interactions

gene neighborhood

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protein homology

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Score

SHK85213.1

Anti-sigma-K factor RskA. (246 aa)

Predicted Functional Partners:

SHK85186.1

0.990

SHK07051.1

0.709

SHK62015.1

0.709

SHK85114.1

0.665

SHK85084.1

0.611

SHK85147.1

0.577

SHJ76808.1

0.569

SHJ92710.1

0.515

SHI54516.1

0.507

SHI37351.1

0.444

Your Current Organism:

Nocardiopsis flavescens

NCBI taxonomy Id: 758803
Other names: CGMCC 4.5723, JCM 17424, N. flavescens, Nocardiopsis flavescens Fang et al. 2011, Nocardiopsis sp. SA6, strain SA6

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
SHI37351.1	SHK85213.1	SAMN05421803_10131	SAMN05421803_13729	RNA polymerase sigma-70 factor, ECF subfamily.	Anti-sigma-K factor RskA.	0.444
SHI54516.1	SHK85213.1	SAMN05421803_101538	SAMN05421803_13729	TIGR03086 family protein.	Anti-sigma-K factor RskA.	0.507
SHJ76808.1	SHK85213.1	SAMN05421803_109127	SAMN05421803_13729	RNA polymerase sigma factor, sigma-70 family; Belongs to the sigma-70 factor family. ECF subfamily.	Anti-sigma-K factor RskA.	0.569
SHJ92710.1	SHK07051.1	SAMN05421803_111136	SAMN05421803_11372	RNA polymerase sigma-70 factor, ECF subfamily.	RNA polymerase sigma-70 factor, ECF subfamily.	0.627
SHJ92710.1	SHK85186.1	SAMN05421803_111136	SAMN05421803_13728	RNA polymerase sigma-70 factor, ECF subfamily.	RNA polymerase sigma-70 factor, ECF subfamily.	0.433
SHJ92710.1	SHK85213.1	SAMN05421803_111136	SAMN05421803_13729	RNA polymerase sigma-70 factor, ECF subfamily.	Anti-sigma-K factor RskA.	0.515
SHK07051.1	SHJ92710.1	SAMN05421803_11372	SAMN05421803_111136	RNA polymerase sigma-70 factor, ECF subfamily.	RNA polymerase sigma-70 factor, ECF subfamily.	0.627
SHK07051.1	SHK62015.1	SAMN05421803_11372	SAMN05421803_12539	RNA polymerase sigma-70 factor, ECF subfamily.	RNA polymerase sigma-70 factor, ECF subfamily.	0.763
SHK07051.1	SHK85213.1	SAMN05421803_11372	SAMN05421803_13729	RNA polymerase sigma-70 factor, ECF subfamily.	Anti-sigma-K factor RskA.	0.709
SHK62015.1	SHK07051.1	SAMN05421803_12539	SAMN05421803_11372	RNA polymerase sigma-70 factor, ECF subfamily.	RNA polymerase sigma-70 factor, ECF subfamily.	0.763
SHK62015.1	SHK85186.1	SAMN05421803_12539	SAMN05421803_13728	RNA polymerase sigma-70 factor, ECF subfamily.	RNA polymerase sigma-70 factor, ECF subfamily.	0.619
SHK62015.1	SHK85213.1	SAMN05421803_12539	SAMN05421803_13729	RNA polymerase sigma-70 factor, ECF subfamily.	Anti-sigma-K factor RskA.	0.709
SHK85084.1	SHK85114.1	SAMN05421803_13725	SAMN05421803_13726	DMSO/TMAO reductase YedYZ, molybdopterin-dependent catalytic subunit.	DMSO/TMAO reductase YedYZ, molybdopterin-dependent catalytic subunit.	0.494
SHK85084.1	SHK85147.1	SAMN05421803_13725	SAMN05421803_13727	DMSO/TMAO reductase YedYZ, molybdopterin-dependent catalytic subunit.	Uncaracterized surface protein containing fasciclin (FAS1) repeats.	0.536
SHK85084.1	SHK85186.1	SAMN05421803_13725	SAMN05421803_13728	DMSO/TMAO reductase YedYZ, molybdopterin-dependent catalytic subunit.	RNA polymerase sigma-70 factor, ECF subfamily.	0.530
SHK85084.1	SHK85213.1	SAMN05421803_13725	SAMN05421803_13729	DMSO/TMAO reductase YedYZ, molybdopterin-dependent catalytic subunit.	Anti-sigma-K factor RskA.	0.611
SHK85114.1	SHK85084.1	SAMN05421803_13726	SAMN05421803_13725	DMSO/TMAO reductase YedYZ, molybdopterin-dependent catalytic subunit.	DMSO/TMAO reductase YedYZ, molybdopterin-dependent catalytic subunit.	0.494
SHK85114.1	SHK85147.1	SAMN05421803_13726	SAMN05421803_13727	DMSO/TMAO reductase YedYZ, molybdopterin-dependent catalytic subunit.	Uncaracterized surface protein containing fasciclin (FAS1) repeats.	0.687
SHK85114.1	SHK85186.1	SAMN05421803_13726	SAMN05421803_13728	DMSO/TMAO reductase YedYZ, molybdopterin-dependent catalytic subunit.	RNA polymerase sigma-70 factor, ECF subfamily.	0.585
SHK85114.1	SHK85213.1	SAMN05421803_13726	SAMN05421803_13729	DMSO/TMAO reductase YedYZ, molybdopterin-dependent catalytic subunit.	Anti-sigma-K factor RskA.	0.665