STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMD41971.1Hypothetical protein. (56 aa)    
Predicted Functional Partners:
SMD41972.1
Hypothetical protein.
       0.773
SMD41973.1
Rhs element Vgr protein.
       0.768
SMD41974.1
Zn-binding Pro-Ala-Ala-Arg (PAAR) domain-containing protein, incolved in TypeVI secretion.
       0.767
SMD41975.1
Hypothetical protein.
       0.767
SMD41969.1
Conserved hypothetical phage tail region protein.
       0.757
SMD41970.1
Conserved hypothetical phage tail region protein.
       0.757
SMD41976.1
Hypothetical protein.
       0.756
SMD41977.1
Hypothetical protein.
       0.756
SMD41978.1
Hypothetical protein.
       0.756
SMD41979.1
Hypothetical protein.
       0.756
Your Current Organism:
Aquiflexum balticum
NCBI taxonomy Id: 758820
Other names: A. balticum DSM 16537, Aquiflexum balticum BA160, Aquiflexum balticum DSM 16537, Aquiflexum balticum str. DSM 16537, Aquiflexum balticum strain DSM 16537
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.