STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMD44473.1Rhodanese-related sulfurtransferase. (143 aa)    
Predicted Functional Partners:
SMD41575.1
Amino acid adenylation domain-containing protein.
   
 0.872
SMD46033.1
Hydroxyacylglutathione hydrolase.
 
0.792
SMD44955.1
Rhodanese-related sulfurtransferase.
  
     0.740
SMD41710.1
Sulfite reductase (ferredoxin); Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
    
 0.683
SMD44271.1
FAD/FMN-containing dehydrogenase.
    
 0.621
ybeY
rRNA maturation RNase YbeY; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.
    
   0.606
SMD43694.1
Cystathionine beta-synthase.
    
 0.573
rpsQ
Small subunit ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.
  
   0.566
SMD44472.1
Hypothetical protein.
       0.562
SMD43208.1
Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains.
    
 0.497
Your Current Organism:
Aquiflexum balticum
NCBI taxonomy Id: 758820
Other names: A. balticum DSM 16537, Aquiflexum balticum BA160, Aquiflexum balticum DSM 16537, Aquiflexum balticum str. DSM 16537, Aquiflexum balticum strain DSM 16537
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