STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFL41931.1FHA domain-containing protein. (211 aa)    
Predicted Functional Partners:
SFL98549.1
ATP-, maltotriose-and DNA-dependent transcriptional regulator MalT.
  
 0.928
SFM76232.1
Serine/threonine protein kinase.
 
 
 0.915
SFM10603.1
Serine/threonine protein kinase.
 
 
 0.909
SFM06632.1
2-oxoglutarate dehydrogenase E1 component.
    
 
 0.901
SFL64892.1
Hypothetical protein.
 
 
 
 0.893
SFM74046.1
Serine/threonine protein kinase.
 
 
 
 0.882
SFL97989.1
Type III secretion protein V.
  
  
 0.849
SFM35811.1
Glutamate synthase (NADPH/NADH) large chain.
    
   0.844
SFL98209.1
Type III secretion protein J.
  
  
 0.833
SFM74419.1
Formylglycine-generating enzyme, required for sulfatase activity, contains SUMF1/FGE domain.
 
 
 
 0.823
Your Current Organism:
Rugamonas rubra
NCBI taxonomy Id: 758825
Other names: ATCC 43154, CCM 3730, R. rubra, strain MOM 28/2/79
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.