STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFL45496.1Cystathionine gamma-synthase. (509 aa)    
Predicted Functional Partners:
SFM54810.1
Methionine synthase (B12-dependent); Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
  
 
 0.949
SFL73721.1
Methylenetetrahydrofolate reductase (NADPH); Belongs to the methylenetetrahydrofolate reductase family.
  
 0.935
SFL45548.1
Fatty acid desaturase.
 
     0.926
SFL45514.1
Valyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
 
  
 0.892
SFL45631.1
Iron-containing redox enzyme.
 
     0.848
metE
Methionine synthase (B12-independent); Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation; Belongs to the vitamin-B12 independent methionine synthase family.
  
 
 0.848
SFL42674.1
Cysteine synthase A; Belongs to the cysteine synthase/cystathionine beta- synthase family.
  
 0.840
SFL82842.1
Cysteine synthase B; Belongs to the cysteine synthase/cystathionine beta- synthase family.
  
 0.840
SFM63132.1
Cystathionine beta-synthase.
  
 0.840
SFM70031.1
Cysteine synthase.
  
 0.840
Your Current Organism:
Rugamonas rubra
NCBI taxonomy Id: 758825
Other names: ATCC 43154, CCM 3730, R. rubra, strain MOM 28/2/79
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