STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFL48160.1Nitrate/nitrite transport system substrate-binding protein. (415 aa)    
Predicted Functional Partners:
SFL48176.1
Nitrate/nitrite transport system permease protein.
 
 0.998
SFL48193.1
Nitrate/nitrite transport system ATP-binding protein.
 
 0.986
SFL89079.1
NitT/TauT family transport system ATP-binding protein.
 
 0.948
SFL89400.1
NitT/TauT family transport system ATP-binding protein.
 
 0.944
SFL69377.1
NitT/TauT family transport system ATP-binding protein.
 
 0.943
SFM86836.1
Assimilatory nitrate reductase catalytic subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily.
 
 
 0.934
SFL46118.1
NitT/TauT family transport system ATP-binding protein.
 
 0.933
SFL89358.1
NitT/TauT family transport system permease protein.
 
 0.897
SFM86814.1
Nitrite reductase (NADH) large subunit.
 
 
 0.872
SFL89032.1
Taurine transport system permease protein.
 
 
 0.861
Your Current Organism:
Rugamonas rubra
NCBI taxonomy Id: 758825
Other names: ATCC 43154, CCM 3730, R. rubra, strain MOM 28/2/79
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