STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFL63828.1Iron complex outermembrane recepter protein. (799 aa)    
Predicted Functional Partners:
SFL48647.1
Iron complex outermembrane recepter protein.
  
 
  0.779
SFL63808.1
Predicted epimerase YddE/YHI9, PhzF superfamily.
       0.773
SFM51714.1
Iron complex outermembrane recepter protein.
  
 
 0.773
SFM42535.1
Iron complex outermembrane recepter protein.
  
 
 0.761
SFM11056.1
Iron complex outermembrane recepter protein.
  
 
 0.760
SFM02752.1
Outer membrane receptor proteins, mostly Fe transport.
  
 
  0.728
SFM10815.1
TonB-dependent Receptor Plug Domain.
  
 
  0.714
SFL68182.1
Iron complex outermembrane recepter protein.
  
 
 0.713
SFL83575.1
Iron complex outermembrane recepter protein.
 
  
 0.708
SFL75563.1
Outer membrane receptor proteins, mostly Fe transport.
  
     0.650
Your Current Organism:
Rugamonas rubra
NCBI taxonomy Id: 758825
Other names: ATCC 43154, CCM 3730, R. rubra, strain MOM 28/2/79
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