Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFL43063.1 | SFL55679.1 | SAMN02982985_00087 | SAMN02982985_00662 | PEP-CTERM protein-sorting domain-containing protein. | Outer membrane protein. | 0.415 |
SFL43063.1 | SFL55723.1 | SAMN02982985_00087 | SAMN02982985_00664 | PEP-CTERM protein-sorting domain-containing protein. | Regulator of sigma E protease. | 0.601 |
SFL43063.1 | SFL74175.1 | SAMN02982985_00087 | SAMN02982985_01310 | PEP-CTERM protein-sorting domain-containing protein. | NTE family protein. | 0.960 |
SFL43063.1 | SFM02960.1 | SAMN02982985_00087 | SAMN02982985_02417 | PEP-CTERM protein-sorting domain-containing protein. | Outer membrane protein assembly factor BamC. | 0.929 |
SFL43063.1 | SFM28033.1 | SAMN02982985_00087 | SAMN02982985_03479 | PEP-CTERM protein-sorting domain-containing protein. | Phospholipase A1; Hydrolysis of phosphatidylcholine with phospholipase A2 (EC 3.1.1.4) and phospholipase A1 (EC 3.1.1.32) activities. Belongs to the phospholipase A1 family. | 0.793 |
SFL43063.1 | SFM43951.1 | SAMN02982985_00087 | SAMN02982985_04072 | PEP-CTERM protein-sorting domain-containing protein. | Hypothetical protein. | 0.813 |
SFL43063.1 | bamD | SAMN02982985_00087 | SAMN02982985_03269 | PEP-CTERM protein-sorting domain-containing protein. | Outer membrane protein assembly factor BamD; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. | 0.955 |
SFL43063.1 | bamE | SAMN02982985_00087 | SAMN02982985_03569 | PEP-CTERM protein-sorting domain-containing protein. | Outer membrane protein assembly factor BamE; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. | 0.813 |
SFL55679.1 | SFL43063.1 | SAMN02982985_00662 | SAMN02982985_00087 | Outer membrane protein. | PEP-CTERM protein-sorting domain-containing protein. | 0.415 |
SFL55679.1 | SFL55723.1 | SAMN02982985_00662 | SAMN02982985_00664 | Outer membrane protein. | Regulator of sigma E protease. | 0.821 |
SFL55679.1 | SFL74175.1 | SAMN02982985_00662 | SAMN02982985_01310 | Outer membrane protein. | NTE family protein. | 0.849 |
SFL55679.1 | SFM02960.1 | SAMN02982985_00662 | SAMN02982985_02417 | Outer membrane protein. | Outer membrane protein assembly factor BamC. | 0.667 |
SFL55679.1 | bamB | SAMN02982985_00662 | SAMN02982985_03991 | Outer membrane protein. | Outer membrane protein assembly factor BamB; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. | 0.522 |
SFL55679.1 | bamD | SAMN02982985_00662 | SAMN02982985_03269 | Outer membrane protein. | Outer membrane protein assembly factor BamD; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. | 0.439 |
SFL55679.1 | bamE | SAMN02982985_00662 | SAMN02982985_03569 | Outer membrane protein. | Outer membrane protein assembly factor BamE; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. | 0.487 |
SFL55723.1 | SFL43063.1 | SAMN02982985_00664 | SAMN02982985_00087 | Regulator of sigma E protease. | PEP-CTERM protein-sorting domain-containing protein. | 0.601 |
SFL55723.1 | SFL55679.1 | SAMN02982985_00664 | SAMN02982985_00662 | Regulator of sigma E protease. | Outer membrane protein. | 0.821 |
SFL55723.1 | SFL74175.1 | SAMN02982985_00664 | SAMN02982985_01310 | Regulator of sigma E protease. | NTE family protein. | 0.889 |
SFL55723.1 | SFM00431.1 | SAMN02982985_00664 | SAMN02982985_02376 | Regulator of sigma E protease. | PEP-CTERM protein-sorting domain-containing protein/MYXO-CTERM domain-containing protein/choice-of-anchor A domain-containing protein. | 0.530 |
SFL55723.1 | bamB | SAMN02982985_00664 | SAMN02982985_03991 | Regulator of sigma E protease. | Outer membrane protein assembly factor BamB; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. | 0.641 |
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