STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFL74256.1General secretion pathway protein D. (734 aa)    
Predicted Functional Partners:
SFL74196.1
General secretion pathway protein C.
  
 
 0.980
SFL97875.1
Type III secretion protein R.
  
 
 0.973
SFL97838.1
Type III secretion protein T.
  
 
 0.966
SFL98209.1
Type III secretion protein J.
  
 
 0.966
SFL97858.1
Type III secretion protein S.
  
 
 0.965
SFL74213.1
General secretion pathway protein F.
 
  
 0.957
SFL74423.1
General secretion pathway protein G.
  
 0.953
SFL74391.1
General secretion pathway protein I.
 
  
 0.951
SFL74360.1
General secretion pathway protein K.
 
   
 0.949
SFL74236.1
General secretion pathway protein E; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins.
  
 0.948
Your Current Organism:
Rugamonas rubra
NCBI taxonomy Id: 758825
Other names: ATCC 43154, CCM 3730, R. rubra, strain MOM 28/2/79
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.