STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFL74360.1General secretion pathway protein K. (318 aa)    
Predicted Functional Partners:
SFL74379.1
General secretion pathway protein J.
 
 
 0.999
SFL74391.1
General secretion pathway protein I.
 
 
 0.999
SFL74408.1
General secretion pathway protein H.
 
 
 0.990
SFL74423.1
General secretion pathway protein G.
 
 0.987
SFL74256.1
General secretion pathway protein D.
 
   
 0.949
SFL74339.1
General secretion pathway protein L; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins.
 
  
 0.948
SFL84924.1
General secretion pathway protein G.
 
 
 0.932
SFL74213.1
General secretion pathway protein F.
 
   
 0.877
SFM22503.1
MSHA pilin protein MshA.
 
 
 0.836
SFM22569.1
MSHA biogenesis protein MshO.
 
 
 0.833
Your Current Organism:
Rugamonas rubra
NCBI taxonomy Id: 758825
Other names: ATCC 43154, CCM 3730, R. rubra, strain MOM 28/2/79
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.