STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFL77629.1Uncharacterized conserved protein YbaA, DUF1428 family. (119 aa)    
Predicted Functional Partners:
SFL77613.1
PGAP1-like protein.
       0.697
SFM14191.1
Hypothetical protein.
   
    0.697
SFM81493.1
Protein of unknown function.
   
    0.611
SFL77648.1
Hemolysin activation/secretion protein.
       0.520
SFL77665.1
Filamentous hemagglutinin family N-terminal domain-containing protein.
       0.520
SFM00509.1
Uncharacterized conserved protein PhnB, glyoxalase superfamily.
 
    0.484
SFM21869.1
PhoD-like phosphatase.
  
  
  0.473
SFL77592.1
Glutathione S-transferase; Belongs to the GST superfamily.
       0.468
SFL55986.1
Uncharacterized conserved protein.
  
    0.414
Your Current Organism:
Rugamonas rubra
NCBI taxonomy Id: 758825
Other names: ATCC 43154, CCM 3730, R. rubra, strain MOM 28/2/79
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.