STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFL84247.1Exosortase B. (297 aa)    
Predicted Functional Partners:
atpE
F-type H+-transporting ATPase subunit c; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.
  
 0.998
SFL84209.1
Chain length determinant protein EpsF.
 
     0.942
SFL84265.1
EpsI family protein.
      0.933
SFL84227.1
Chain length determinant protein tyrosine kinase EpsG.
 
    0.932
SFL84188.1
Polysaccharide export outer membrane protein.
 
     0.901
SFL84172.1
Peptidyl-prolyl cis-trans isomerase, EpsD family.
 
 
   0.890
SFL84133.1
Exopolysaccharide biosynthesis operon protein EpsL.
 
     0.844
SFL84117.1
Hypothetical protein.
 
     0.776
SFM23767.1
PEP-CTERM protein-sorting domain-containing protein/choice-of-anchor A domain-containing protein.
  
     0.753
SFL56213.1
PAP2 superfamily protein.
    
 
 0.742
Your Current Organism:
Rugamonas rubra
NCBI taxonomy Id: 758825
Other names: ATCC 43154, CCM 3730, R. rubra, strain MOM 28/2/79
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.