STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFL89358.1NitT/TauT family transport system permease protein. (256 aa)    
Predicted Functional Partners:
SFL89379.1
NitT/TauT family transport system substrate-binding protein.
 
 
 0.982
SFL89400.1
NitT/TauT family transport system ATP-binding protein.
 
 0.981
SFL46118.1
NitT/TauT family transport system ATP-binding protein.
 
 0.943
SFL48193.1
Nitrate/nitrite transport system ATP-binding protein.
 
 0.943
SFL69377.1
NitT/TauT family transport system ATP-binding protein.
 
 0.943
SFL89079.1
NitT/TauT family transport system ATP-binding protein.
 
 0.942
SFL89059.1
NitT/TauT family transport system substrate-binding protein.
 
 
 0.914
SFM86707.1
Nitrate/nitrite transport system substrate-binding protein.
 
 0.898
SFL48160.1
Nitrate/nitrite transport system substrate-binding protein.
 
 0.897
SFL90292.1
NitT/TauT family transport system substrate-binding protein.
 
 
 0.896
Your Current Organism:
Rugamonas rubra
NCBI taxonomy Id: 758825
Other names: ATCC 43154, CCM 3730, R. rubra, strain MOM 28/2/79
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.