STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFL89400.1NitT/TauT family transport system ATP-binding protein. (287 aa)    
Predicted Functional Partners:
SFL89358.1
NitT/TauT family transport system permease protein.
 
 0.981
SFL89420.1
Acyl-CoA dehydrogenase.
 
    0.979
SFL89445.1
Uncharacterized peroxidase-related enzyme; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family.
 
    0.974
SFL89379.1
NitT/TauT family transport system substrate-binding protein.
 
 0.967
SFL48176.1
Nitrate/nitrite transport system permease protein.
 
 0.961
SFL89032.1
Taurine transport system permease protein.
 
 0.956
SFL46100.1
NitT/TauT family transport system permease protein.
 
 0.951
SFL69361.1
NitT/TauT family transport system permease protein.
 
 0.948
SFL48160.1
Nitrate/nitrite transport system substrate-binding protein.
 
 0.944
SFM86707.1
Nitrate/nitrite transport system substrate-binding protein.
 
 0.942
Your Current Organism:
Rugamonas rubra
NCBI taxonomy Id: 758825
Other names: ATCC 43154, CCM 3730, R. rubra, strain MOM 28/2/79
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.