STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFL91288.1Protein of unknown function. (343 aa)    
Predicted Functional Partners:
SFM84230.1
Protein of unknown function.
  
 0.840
SFM94348.1
Arylsulfatase A.
  
 0.840
SFM23201.1
Acyl transferase domain-containing protein.
  
 
 0.835
SFL91314.1
Hypothetical protein.
 
     0.823
SFM93772.1
D-sorbitol dehydrogenase (acceptor).
  
 
 0.823
SFL84340.1
Heparinase II/III-like protein.
  
 
 0.804
SFM82928.1
Cellobiose phosphorylase.
    
 0.796
SFM78992.1
Hypothetical protein.
   
 0.786
SFL84482.1
UDP-glucose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family.
  
 
 0.766
SFM09788.1
Microbial collagenase.
 
    0.761
Your Current Organism:
Rugamonas rubra
NCBI taxonomy Id: 758825
Other names: ATCC 43154, CCM 3730, R. rubra, strain MOM 28/2/79
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.