STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFM03493.1Hypothetical protein. (215 aa)    
Predicted Functional Partners:
SFM03511.1
Hypothetical protein.
   
 0.993
SFM03528.1
Uncharacterized conserved protein, contains GH25 family domain.
 
   
 0.945
SFM03564.1
Sulfite reductase (NADPH) flavoprotein alpha-component.
 
     0.898
SFM03548.1
Thiamine biosynthesis lipoprotein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. Belongs to the ApbE family.
 
     0.887
SFL98570.1
Sulfite reductase (NADPH) flavoprotein alpha-component.
 
  
 0.697
SFL78763.1
Uncharacterized iron-regulated membrane protein.
 
  
 0.562
SFM21545.1
Thiamine biosynthesis lipoprotein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. Belongs to the ApbE family.
 
     0.535
SFM93152.1
Outer-membrane receptor for ferric coprogen and ferric-rhodotorulic acid.
 
   
 0.464
SFM31187.1
Catecholate siderophore receptor.
 
  
 0.424
SFL78728.1
Outer-membrane receptor for ferric coprogen and ferric-rhodotorulic acid.
 
   
 0.423
Your Current Organism:
Rugamonas rubra
NCBI taxonomy Id: 758825
Other names: ATCC 43154, CCM 3730, R. rubra, strain MOM 28/2/79
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