STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFM09165.1Major Facilitator Superfamily protein. (404 aa)    
Predicted Functional Partners:
SFL49782.1
MFS transporter, OFA family, oxalate/formate antiporter.
  
  
 0.703
SFM54810.1
Methionine synthase (B12-dependent); Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
  
 
  0.646
SFL91124.1
Sugar phosphate permease.
  
  
 0.600
SFL82560.1
Chorismate mutase.
  
 
 0.596
SFM26708.1
Amino acid adenylation domain-containing protein.
   
 
 0.595
SFM94159.1
Thioesterase domain-containing protein.
   
 
 0.595
SFL77574.1
Para-aminobenzoate synthetase / 4-amino-4-deoxychorismate lyase.
   
 
 0.541
SFL87825.1
Amino acid adenylation domain-containing protein.
    
 0.538
SFM09181.1
HD-like signal output (HDOD) domain, no enzymatic activity.
       0.532
SFM32146.1
Predicted arabinose efflux permease, MFS family.
  
     0.513
Your Current Organism:
Rugamonas rubra
NCBI taxonomy Id: 758825
Other names: ATCC 43154, CCM 3730, R. rubra, strain MOM 28/2/79
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