STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFM22071.1Acyl-CoA dehydrogenase. (379 aa)    
Predicted Functional Partners:
SFM27538.1
3-hydroxyacyl-CoA dehydrogenase.
 
 0.986
SFM22052.1
Acyl-CoA dehydrogenase.
    
0.982
SFM58229.1
3-hydroxyacyl-CoA dehydrogenase.
  
 0.968
SFM68945.1
Enoyl-CoA hydratase/carnithine racemase.
  
 0.968
SFL80866.1
Electron transfer flavoprotein alpha subunit.
 0.948
SFM22089.1
Acyl dehydratase.
 
 0.936
SFL80848.1
Electron transfer flavoprotein beta subunit.
 
 
 0.907
SFM26708.1
Amino acid adenylation domain-containing protein.
  
 
 0.852
SFM94159.1
Thioesterase domain-containing protein.
  
 
 0.852
SFL87825.1
Amino acid adenylation domain-containing protein.
  
 
 0.834
Your Current Organism:
Rugamonas rubra
NCBI taxonomy Id: 758825
Other names: ATCC 43154, CCM 3730, R. rubra, strain MOM 28/2/79
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