Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFL44871.1 | SFM28443.1 | SAMN02982985_00190 | SAMN02982985_03507 | Hypothetical protein. | Papain family cysteine protease. | 0.765 |
SFL47717.1 | SFM28443.1 | SAMN02982985_00359 | SAMN02982985_03507 | Peptidylprolyl isomerase. | Papain family cysteine protease. | 0.789 |
SFL47717.1 | SFM55472.1 | SAMN02982985_00359 | SAMN02982985_04473 | Peptidylprolyl isomerase. | Hypothetical protein. | 0.862 |
SFL47717.1 | rpsK | SAMN02982985_00359 | SAMN02982985_05049 | Peptidylprolyl isomerase. | Small subunit ribosomal protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family. | 0.781 |
SFL49873.1 | SFM28443.1 | SAMN02982985_00504 | SAMN02982985_03507 | Protein of unknown function. | Papain family cysteine protease. | 0.765 |
SFL52701.1 | SFL52741.1 | SAMN02982985_00517 | SAMN02982985_00519 | Protein of unknown function. | Hypothetical protein. | 0.804 |
SFL52701.1 | SFM28443.1 | SAMN02982985_00517 | SAMN02982985_03507 | Protein of unknown function. | Papain family cysteine protease. | 0.800 |
SFL52741.1 | SFL52701.1 | SAMN02982985_00519 | SAMN02982985_00517 | Hypothetical protein. | Protein of unknown function. | 0.804 |
SFL52741.1 | SFM28443.1 | SAMN02982985_00519 | SAMN02982985_03507 | Hypothetical protein. | Papain family cysteine protease. | 0.765 |
SFL65668.1 | SFM28443.1 | SAMN02982985_00995 | SAMN02982985_03507 | Hypothetical protein. | Papain family cysteine protease. | 0.765 |
SFM19617.1 | SFM19639.1 | SAMN02982985_03163 | SAMN02982985_03164 | Peptidyl-prolyl cis-trans isomerase B (cyclophilin B); PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. | Peptidyl-prolyl cis-trans isomerase A (cyclophilin A); PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. | 0.582 |
SFM19617.1 | SFM28443.1 | SAMN02982985_03163 | SAMN02982985_03507 | Peptidyl-prolyl cis-trans isomerase B (cyclophilin B); PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. | Papain family cysteine protease. | 0.789 |
SFM19617.1 | SFM55472.1 | SAMN02982985_03163 | SAMN02982985_04473 | Peptidyl-prolyl cis-trans isomerase B (cyclophilin B); PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. | Hypothetical protein. | 0.862 |
SFM19617.1 | rpsK | SAMN02982985_03163 | SAMN02982985_05049 | Peptidyl-prolyl cis-trans isomerase B (cyclophilin B); PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. | Small subunit ribosomal protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family. | 0.781 |
SFM19639.1 | SFM19617.1 | SAMN02982985_03164 | SAMN02982985_03163 | Peptidyl-prolyl cis-trans isomerase A (cyclophilin A); PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. | Peptidyl-prolyl cis-trans isomerase B (cyclophilin B); PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. | 0.582 |
SFM19639.1 | SFM28443.1 | SAMN02982985_03164 | SAMN02982985_03507 | Peptidyl-prolyl cis-trans isomerase A (cyclophilin A); PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. | Papain family cysteine protease. | 0.789 |
SFM19639.1 | SFM55472.1 | SAMN02982985_03164 | SAMN02982985_04473 | Peptidyl-prolyl cis-trans isomerase A (cyclophilin A); PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. | Hypothetical protein. | 0.862 |
SFM19639.1 | rpsK | SAMN02982985_03164 | SAMN02982985_05049 | Peptidyl-prolyl cis-trans isomerase A (cyclophilin A); PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. | Small subunit ribosomal protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family. | 0.781 |
SFM28443.1 | SFL44871.1 | SAMN02982985_03507 | SAMN02982985_00190 | Papain family cysteine protease. | Hypothetical protein. | 0.765 |
SFM28443.1 | SFL47717.1 | SAMN02982985_03507 | SAMN02982985_00359 | Papain family cysteine protease. | Peptidylprolyl isomerase. | 0.789 |
page 1 of 2