STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFM35871.1phospholipid/cholesterol/gamma-HCH transport system permease protein. (260 aa)    
Predicted Functional Partners:
SFM35852.1
phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein.
 0.999
SFM35891.1
phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein.
 0.999
SFM92200.1
phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein.
 0.997
SFM92214.1
phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein.
  
 0.966
SFL93162.1
phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein.
  
 0.945
SFM35935.1
Phospholipid transport system substrate-binding protein.
 
 
 0.940
SFM27375.1
Stage II sporulation protein AA (anti-sigma F factor antagonist); Belongs to the anti-sigma-factor antagonist family.
   
  0.927
SFM83104.1
Anti-anti-sigma factor.
   
  0.927
SFM35952.1
Phospholipid transport system transporter-binding protein.
  
 0.847
SFM35919.1
Phospholipid-binding lipoprotein MlaA.
 
   
 0.807
Your Current Organism:
Rugamonas rubra
NCBI taxonomy Id: 758825
Other names: ATCC 43154, CCM 3730, R. rubra, strain MOM 28/2/79
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