STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFM47761.1Putative serine protein kinase, PrkA. (652 aa)    
Predicted Functional Partners:
SFM47723.1
Stage V sporulation protein R.
 
  
 0.993
SFM47744.1
Hypothetical protein; Belongs to the UPF0229 family.
 
  
 0.993
SFL66606.1
Hypothetical protein; Belongs to the UPF0229 family.
  
 0.973
SFL66621.1
SpoVR like protein.
 
  
 0.973
SFM14243.1
Membrane-anchored ribosome-binding protein, inhibits growth in stationary phase, ElaB/YqjD/DUF883 family.
   
    0.850
SFL55015.1
2,5-diketo-D-gluconate reductase A.
   
    0.637
SFM19987.1
2,5-diketo-D-gluconate reductase B.
   
    0.637
SFL52759.1
Hypothetical protein.
   
    0.611
SFM04639.1
PhoH-like ATPase.
   
  
 0.611
SFM61010.1
NAD(P)H dehydrogenase (quinone); Belongs to the WrbA family.
   
    0.611
Your Current Organism:
Rugamonas rubra
NCBI taxonomy Id: 758825
Other names: ATCC 43154, CCM 3730, R. rubra, strain MOM 28/2/79
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.