STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFM61519.1Hypothetical protein. (45 aa)    
Predicted Functional Partners:
SFM61541.1
Bacteriocin biosynthesis cyclodehydratase domain-containing protein.
       0.462
SFM61561.1
Ribosomal protein S12 methylthiotransferase accessory factor.
       0.462
SFM61498.1
Methyltransferase, TIGR00027 family; Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity.
       0.445
SFM61573.1
SagB-type dehydrogenase domain-containing protein.
       0.441
SFM61595.1
ABC-type multidrug transport system, ATPase component.
       0.441
SFM61611.1
ABC-2 type transport system permease protein.
       0.441
Your Current Organism:
Rugamonas rubra
NCBI taxonomy Id: 758825
Other names: ATCC 43154, CCM 3730, R. rubra, strain MOM 28/2/79
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.