STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFM65236.1Transposase and inactivated derivatives, IS30 family. (338 aa)    
Predicted Functional Partners:
SFM50363.1
Bifunctional isochorismate lyase / aryl carrier protein.
    
   0.829
SFM64933.1
Hypothetical protein.
   
   0.708
SFL44343.1
ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE.
    
   0.706
SFL65541.1
Flagellar motor switch protein FliM; FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation.
    
   0.606
SFM58298.1
Ribosome-associated heat shock protein Hsp15; Belongs to the HSP15 family.
    
   0.606
SFM77198.1
Arsenate reductase; Belongs to the ArsC family.
    
   0.606
SFL57376.1
Flagellar motor switch protein FliG.
    
   0.491
SFL65413.1
Flagellar motor switch protein FliG; FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation.
    
   0.491
SFL57312.1
Flagellar motor switch protein FliM.
    
   0.408
SFM64671.1
Site-specific DNA recombinase.
 
   
 0.401
Your Current Organism:
Rugamonas rubra
NCBI taxonomy Id: 758825
Other names: ATCC 43154, CCM 3730, R. rubra, strain MOM 28/2/79
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