STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFM68748.1Two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarX. (648 aa)    
Predicted Functional Partners:
SFM68770.1
Two component transcriptional regulator, LuxR family.
 0.989
SFL54751.1
Two component transcriptional regulator, LuxR family.
 
 0.910
SFL58057.1
Two component transcriptional regulator, LuxR family.
 
 0.904
SFM25912.1
DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains.
 
 0.898
SFM69617.1
DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains.
 
 0.898
SFM69657.1
Two component transcriptional regulator, LuxR family.
 0.898
SFL43225.1
Response regulator receiver domain-containing protein.
  
 0.897
SFM13098.1
DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains.
 0.897
SFL43047.1
Two component transcriptional regulator, LuxR family.
 
 0.896
SFL42983.1
Two-component system, NarL family, response regulator DesR.
 
 0.887
Your Current Organism:
Rugamonas rubra
NCBI taxonomy Id: 758825
Other names: ATCC 43154, CCM 3730, R. rubra, strain MOM 28/2/79
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.