STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFM86757.1MFS transporter, NNP family, nitrate/nitrite transporter. (434 aa)    
Predicted Functional Partners:
SFM86777.1
Assimilatory nitrite reductase (NAD(P)H) large subunit precursor; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
 
 0.968
SFM86836.1
Assimilatory nitrate reductase catalytic subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily.
 
 
 0.941
SFM86791.1
Nitrite reductase (NADH) small subunit.
 
 
 0.936
SFM68571.1
Nitrate reductase alpha subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
 
 0.934
SFM86814.1
Nitrite reductase (NADH) large subunit.
 
 0.924
SFM68593.1
Respiratory nitrate reductase beta subunit.
 
 
 0.893
SFM68635.1
Nitrate reductase gamma subunit.
 
 
 0.886
SFM68612.1
Respiratory nitrate reductase chaperone NarJ.
 
  
 0.784
SFM78860.1
MFS transporter, NNP family, nitrate/nitrite transporter.
 
 0.762
SFM79055.1
Dissimilatory nitrite reductase (NO-forming), copper type apoprotein; Belongs to the multicopper oxidase family.
    
 0.723
Your Current Organism:
Rugamonas rubra
NCBI taxonomy Id: 758825
Other names: ATCC 43154, CCM 3730, R. rubra, strain MOM 28/2/79
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